#include "mp.h" #include #include "utils.h" static const double EPSILON = 1e-3; arma::mat mp::lamp(const arma::mat &X, const arma::uvec &sampleIndices, const arma::mat &Ys) { arma::mat projection(X.n_rows, 2); lamp(X, sampleIndices, Ys, projection); return projection; } void mp::lamp(const arma::mat &X, const arma::uvec &sampleIndices, const arma::mat &Ys, arma::mat &Y) { int n = uintToInt(X.n_rows); const arma::mat &Xs = X.rows(sampleIndices); arma::uword sampleSize = sampleIndices.n_elem; #pragma omp parallel for shared(X, Xs, Ys, Y, n) for (int i = 0; i < n; i++) { const arma::rowvec &point = X.row(i); // calculate alphas arma::rowvec alphas(sampleSize); for (arma::uword j = 0; j < sampleSize; j++) { double dist = arma::accu(arma::square(Xs.row(j) - point)); alphas[j] = 1. / std::max(dist, EPSILON); } double alphas_sum = arma::accu(alphas); // calculate \tilde{X} and \tilde{Y} arma::rowvec Xtil = arma::sum(alphas * Xs, 0) / alphas_sum; arma::rowvec Ytil = arma::sum(alphas * Ys, 0) / alphas_sum; // calculate \hat{X} and \hat{Y} arma::mat Xhat = Xs; Xhat.each_row() -= Xtil; arma::mat Yhat = Ys; Yhat.each_row() -= Ytil; // calculate A and B alphas = arma::sqrt(alphas); arma::mat &At = Xhat; inplace_trans(At); At.each_row() %= alphas; arma::mat &B = Yhat; B.each_col() %= alphas.t(); arma::mat U(Ys.n_rows, Ys.n_cols), V(Ys.n_cols, Ys.n_cols); arma::vec s(Ys.n_cols); arma::svd(U, s, V, At * B); arma::mat M = U.cols(0, 1) * V.t(); Y(i, arma::span(0, 1)) = (point - Xtil) * M + Ytil; } for (arma::uword i = 0; i < sampleSize; i++) { Y.row(sampleIndices[i]) = Ys.row(i); } }